Difference between revisions of "TSS:Hg 104837.1"
From referenceTSS
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| Line 5: | Line 5: | ||
|RBPI= | |RBPI= | ||
|RP66= | |RP66= | ||
| − | |all_trans= | + | |all_trans=HGNC:9921 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=47348388 | |end=47348388 | ||
|end_of_center_position=47348370 | |end_of_center_position=47348370 | ||
|entrez_id=5949 | |entrez_id=5949 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=D10S64 | + | |gene_alias=D10S64{{!}}D10S65{{!}}D10S66{{!}}IRBP{{!}}RBPI{{!}}RP66 |
|gene_description=retinol binding protein 3 | |gene_description=retinol binding protein 3 | ||
|gene_id=5949 | |gene_id=5949 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_002900 | |nearest_refseq=NM_002900 | ||
|nearest_unigene=Hs.591928 | |nearest_unigene=Hs.591928 | ||
| − | |num_trans= | + | |num_trans=5949 |
|species=human | |species=human | ||
|start=47348351 | |start=47348351 | ||
|start_of_center_position=47348369 | |start_of_center_position=47348369 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000584701. | + | |transcript_name=ENST00000584701.2 DQ426897 M22453 AB593121 BC039844 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104837.1 | |tss_id=hg_104837.1 | ||
Latest revision as of 19:18, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 47348369 |
|---|---|
| End of the center position in the TSS region: | 47348370 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000584701.2 DQ426897 M22453 AB593121 BC039844 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5949 |
| All_trans: | HGNC:9921 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_002900 |
| Entrez ID: | 5949 |
| Nearest Unigene: | Hs.591928 |
| Nearest Refseq: | NM_002900 |
| Nearest Ensembl: | ENSG00000265203 |
| Gene Name: | retinol binding protein 3 |
| Gene Alias: | D10S64|D10S65|D10S66|IRBP|RBPI|RP66 |
| Gene Description: | retinol binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
