Difference between revisions of "TSS:Hg 104860.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000360890.6:43 | + | |all_trans=NM_001370154:40 NM_001370153:40 ENST00000360890.6:43 ENST00000325239.11:43 BC034937:43 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=40 |
| − | |distance_to_tss=- | + | |distance_to_tss=-44 |
|end=48684833 | |end=48684833 | ||
|end_of_center_position=48684829 | |end_of_center_position=48684829 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29323 | |hgnc_mgi_id=HGNC:29323 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000128815 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370154 |
|nearest_refseq=NM_020945 | |nearest_refseq=NM_020945 | ||
|nearest_unigene=Hs.287379 | |nearest_unigene=Hs.287379 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=48684824 | |start=48684824 | ||
|start_of_center_position=48684828 | |start_of_center_position=48684828 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001370154.1 NM_001370153.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104860.1 | |tss_id=hg_104860.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:19, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 48684828 |
|---|---|
| End of the center position in the TSS region: | 48684829 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001370154.1 NM_001370153.1 |
|---|---|
| Distance: | 40 |
| Num_trans: | 5 |
| All_trans: | NM_001370154:40 NM_001370153:40 ENST00000360890.6:43 ENST00000325239.11:43 BC034937:43 |
TATA-Box annotation
| Distance to TSS: | -44 |
|---|---|
| Nearest PromoterID: | NM_001370154 |
| Entrez ID: | 57705 |
| Nearest Unigene: | Hs.287379 |
| Nearest Refseq: | NM_020945 |
| Nearest Ensembl: | ENSG00000128815 |
| Gene Name: | WDFY family member 4 |
| Gene Alias: | C10orf64 |
| Gene Description: | WDFY family member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
