Difference between revisions of "TSS:Hg 109541.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|MRT37= | |MRT37= | ||
| − | |all_trans= | + | |all_trans=HGNC:494 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 10: | Line 10: | ||
|entrez_id=288 | |entrez_id=288 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=ANKYRIN-G | + | |gene_alias=ANKYRIN-G{{!}}MRT37 |
|gene_description=ankyrin 3 | |gene_description=ankyrin 3 | ||
|gene_id=288 | |gene_id=288 | ||
| − | |gene_name= | + | |gene_name=ankyrin 3 |
|gene_source=HGNC:494 | |gene_source=HGNC:494 | ||
|gene_symbol=ANK3 | |gene_symbol=ANK3 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001149 | |nearest_refseq=NM_001149 | ||
|nearest_unigene=Hs.499725 | |nearest_unigene=Hs.499725 | ||
| − | |num_trans= | + | |num_trans=288 |
|species=human | |species=human | ||
|start=60572599 | |start=60572599 | ||
|start_of_center_position=60572634 | |start_of_center_position=60572634 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=76(TCTTTTATAAAC,+,0.00) |
| − | |transcript_name=ENST00000503366.5 | + | |transcript_name=ENST00000503366.5 AK295661 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_109541.1 | |tss_id=hg_109541.1 | ||
Latest revision as of 21:00, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 60572634 |
|---|---|
| End of the center position in the TSS region: | 60572635 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000503366.5 AK295661 |
|---|---|
| Distance: | 0 |
| Num_trans: | 288 |
| All_trans: | HGNC:494 |
TATA-Box annotation
| Distance to TSS: | 321 |
|---|---|
| Nearest PromoterID: | NM_001204404 |
| Entrez ID: | 288 |
| Nearest Unigene: | Hs.499725 |
| Nearest Refseq: | NM_001149 |
| Nearest Ensembl: | ENSG00000151150 |
| Gene Name: | ankyrin 3 |
| Gene Alias: | ANKYRIN-G|MRT37 |
| Gene Description: | ankyrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 76(TCTTTTATAAAC,+,0.00) |
