Difference between revisions of "TSS:Hg 232329.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:494 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=132 |
|distance_to_tss=44 | |distance_to_tss=44 | ||
| − | |end= | + | |end=60573088 |
|end_of_center_position=60573088 | |end_of_center_position=60573088 | ||
|entrez_id=84457 | |entrez_id=84457 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=phytanoyl-CoA 2-hydroxylase interacting protein like | |gene_description=phytanoyl-CoA 2-hydroxylase interacting protein like | ||
| − | |gene_id= | + | |gene_id=288 |
| − | |gene_name= | + | |gene_name=ankyrin 3 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:494 |
| − | |gene_symbol= | + | |gene_symbol=ANK3 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:494 |
|nearest_ensembl=ENSG00000165443 | |nearest_ensembl=ENSG00000165443 | ||
|nearest_promoter_id=NM_001143774 | |nearest_promoter_id=NM_001143774 | ||
|nearest_refseq=NM_032439 | |nearest_refseq=NM_032439 | ||
|nearest_unigene=Hs.499704 | |nearest_unigene=Hs.499704 | ||
| − | |num_trans= | + | |num_trans=288 |
|species=human | |species=human | ||
| − | |start= | + | |start=60573087 |
|start_of_center_position=60573087 | |start_of_center_position=60573087 | ||
| − | |strand= | + | |strand=- |
| − | |transcript_name= | + | |transcript_name=AK126851 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232329.1 | |tss_id=hg_232329.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q12955 Q6ZT73 |
}} | }} | ||
Latest revision as of 11:08, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 60573087 |
|---|---|
| End of the center position in the TSS region: | 60573088 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK126851 |
|---|---|
| Distance: | 132 |
| Num_trans: | 288 |
| All_trans: | HGNC:494 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_001143774 |
| Entrez ID: | 84457 |
| Nearest Unigene: | Hs.499704 |
| Nearest Refseq: | NM_032439 |
| Nearest Ensembl: | ENSG00000165443 |
| Gene Name: | ankyrin 3 |
| Gene Alias: | - |
| Gene Description: | phytanoyl-CoA 2-hydroxylase interacting protein like |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
