Difference between revisions of "TSS:Hg 106335.1"
From referenceTSS
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=62950 |
|end=94608762 | |end=94608762 | ||
|end_of_center_position=94608738 | |end_of_center_position=94608738 | ||
|entrez_id=3070 | |entrez_id=3070 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
| − | |gene_alias=ICF4 | + | |gene_alias=ICF4{{!}}LSH{{!}}Nbla10143{{!}}PASG{{!}}SMARCA6 |
| − | |gene_description= | + | |gene_description=helicase, lymphoid specific |
|gene_name=HELLS | |gene_name=HELLS | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000119969 | |nearest_ensembl=ENSG00000119969 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001289075 |
|nearest_refseq=NM_018063 | |nearest_refseq=NM_018063 | ||
|nearest_unigene=Hs.463677 | |nearest_unigene=Hs.463677 | ||
| Line 25: | Line 25: | ||
|start_of_center_position=94608737 | |start_of_center_position=94608737 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=87(TTTTTTAAAGCC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 94608737 |
|---|---|
| End of the center position in the TSS region: | 94608738 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 62950 |
|---|---|
| Nearest PromoterID: | NM_001289075 |
| Entrez ID: | 3070 |
| Nearest Unigene: | Hs.463677 |
| Nearest Refseq: | NM_018063 |
| Nearest Ensembl: | ENSG00000119969 |
| Gene Name: | HELLS |
| Gene Alias: | ICF4|LSH|Nbla10143|PASG|SMARCA6 |
| Gene Description: | helicase, lymphoid specific |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 87(TTTTTTAAAGCC,+,0.00) |
