Difference between revisions of "TSS:Hg 106498.1"
From referenceTSS
| Line 3: | Line 3: | ||
|MRS4L= | |MRS4L= | ||
|NPD016= | |NPD016= | ||
| − | |all_trans=ENST00000566847 | + | |all_trans=ENST00000566847.1:196 BC029589:196 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=196 | |distance=196 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-410 |
|end=99620859 | |end=99620859 | ||
|end_of_center_position=99620850 | |end_of_center_position=99620850 | ||
|entrez_id=81894 | |entrez_id=81894 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=MFRN2 | + | |gene_alias=MFRN2{{!}}MRS3/4{{!}}MRS4L{{!}}NPD016 |
|gene_description=solute carrier family 25 member 28 | |gene_description=solute carrier family 25 member 28 | ||
|gene_name=SLC25A28 | |gene_name=SLC25A28 | ||
| Line 20: | Line 20: | ||
|nearest_refseq=NM_031212 | |nearest_refseq=NM_031212 | ||
|nearest_unigene=Hs.403790 | |nearest_unigene=Hs.403790 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=99620839 | |start=99620839 | ||
|start_of_center_position=99620849 | |start_of_center_position=99620849 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000566847 | + | |transcript_name=ENST00000566847.1 BC029589 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106498.1 | |tss_id=hg_106498.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 99620849 |
|---|---|
| End of the center position in the TSS region: | 99620850 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000566847.1 BC029589 |
|---|---|
| Distance: | 196 |
| Num_trans: | 2 |
| All_trans: | ENST00000566847.1:196 BC029589:196 |
TATA-Box annotation
| Distance to TSS: | -410 |
|---|---|
| Nearest PromoterID: | NM_031212 |
| Entrez ID: | 81894 |
| Nearest Unigene: | Hs.403790 |
| Nearest Refseq: | NM_031212 |
| Nearest Ensembl: | ENSG00000155287 |
| Gene Name: | SLC25A28 |
| Gene Alias: | MFRN2|MRS3/4|MRS4L|NPD016 |
| Gene Description: | solute carrier family 25 member 28 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
