Difference between revisions of "TSS:Mm 104809.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:3702436 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 9: | Line 9: | ||
|entrez_id=100037262 | |entrez_id=100037262 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 12359 | |gene_description=predicted gene 12359 | ||
|gene_id=100037262 | |gene_id=100037262 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_033551 | |nearest_refseq=NR_033551 | ||
|nearest_unigene=Mm.442062 | |nearest_unigene=Mm.442062 | ||
| − | |num_trans= | + | |num_trans=100037262 |
|species=mouse | |species=mouse | ||
|start=98810079 | |start=98810079 | ||
|start_of_center_position=98810090 | |start_of_center_position=98810090 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-87(CCCTCTAAGAGG,-,0.00) |
| − | |transcript_name=ENSMUST00000153181.7 ENSMUST00000139017 | + | |transcript_name=ENSMUST00000153181.7 ENSMUST00000139017.1 AK142978 AK164749 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_104809.1 | |tss_id=mm_104809.1 | ||
Latest revision as of 12:14, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 98810090 |
|---|---|
| End of the center position in the TSS region: | 98810091 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000153181.7 ENSMUST00000139017.1 AK142978 AK164749 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100037262 |
| All_trans: | MGI:3702436 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NR_033551 |
| Entrez ID: | 100037262 |
| Nearest Unigene: | Mm.442062 |
| Nearest Refseq: | NR_033551 |
| Nearest Ensembl: | ENSMUSG00000075576 |
| Gene Name: | predicted gene 12359 |
| Gene Alias: | - |
| Gene Description: | predicted gene 12359 |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -87(CCCTCTAAGAGG,-,0.00) |
