Difference between revisions of "TSS:Hg 232143.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 5: | Line 5: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=21251 |
| − | |end= | + | |end=122237528 |
|end_of_center_position=122237523 | |end_of_center_position=122237523 | ||
| − | |entrez_id= | + | |entrez_id=8872 |
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias= | + | |gene_alias=C10orf7{{!}}D123 |
| − | |gene_description= | + | |gene_description=cell division cycle 123 |
|gene_id=8872 | |gene_id=8872 | ||
| − | |gene_name= | + | |gene_name=CDC123 |
|gene_source=HGNC:16827 | |gene_source=HGNC:16827 | ||
|gene_symbol=CDC123 | |gene_symbol=CDC123 | ||
| Line 21: | Line 21: | ||
|hNUDT5= | |hNUDT5= | ||
|hgnc_mgi_id=HGNC:16827 | |hgnc_mgi_id=HGNC:16827 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000151465 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006023 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_006023 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.412842 |
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=122237516 |
|start_of_center_position=122237522 | |start_of_center_position=122237522 | ||
| − | |strand= | + | |strand=- |
| − | |tata_box= | + | |tata_box=-16(GCTTTTCAAGAG,+,0.00) |
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232143.1 | |tss_id=hg_232143.1 | ||
Latest revision as of 08:30, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 122237522 |
|---|---|
| End of the center position in the TSS region: | 122237523 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000498747.1:-14 uc057rsv.1:-14 |
TATA-Box annotation
| Distance to TSS: | 21251 |
|---|---|
| Nearest PromoterID: | NM_006023 |
| Entrez ID: | 8872 |
| Nearest Unigene: | Hs.412842 |
| Nearest Refseq: | NM_006023 |
| Nearest Ensembl: | ENSG00000151465 |
| Gene Name: | CDC123 |
| Gene Alias: | C10orf7|D123 |
| Gene Description: | cell division cycle 123 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -16(GCTTTTCAAGAG,+,0.00) |
