Difference between revisions of "TSS:Mm 50292.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1349658 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=-234 | |distance=-234 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-46 |
|end=47454719 | |end=47454719 | ||
|end_of_center_position=47454711 | |end_of_center_position=47454711 | ||
|entrez_id=26965 | |entrez_id=26965 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=- | + | |gene_alias=Cul-1 |
|gene_description=cullin 1 | |gene_description=cullin 1 | ||
|gene_id=26965 | |gene_id=26965 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1349658 | |hgnc_mgi_id=MGI:1349658 | ||
|nearest_ensembl=ENSMUSG00000029686 | |nearest_ensembl=ENSMUSG00000029686 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001355550 |
|nearest_refseq=NM_012042 | |nearest_refseq=NM_012042 | ||
|nearest_unigene=Mm.87611 | |nearest_unigene=Mm.87611 | ||
| − | |num_trans= | + | |num_trans=26965 |
|species=mouse | |species=mouse | ||
|start=47454702 | |start=47454702 | ||
Latest revision as of 01:24, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 47454710 |
|---|---|
| End of the center position in the TSS region: | 47454711 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF136441 |
|---|---|
| Distance: | -234 |
| Num_trans: | 26965 |
| All_trans: | MGI:1349658 |
TATA-Box annotation
| Distance to TSS: | -46 |
|---|---|
| Nearest PromoterID: | NM_001355550 |
| Entrez ID: | 26965 |
| Nearest Unigene: | Mm.87611 |
| Nearest Refseq: | NM_012042 |
| Nearest Ensembl: | ENSMUSG00000029686 |
| Gene Name: | cullin 1 |
| Gene Alias: | Cul-1 |
| Gene Description: | cullin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
