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Difference between revisions of "TSS:Hg 184505.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BT019426:2 AB002392:-24 U25033:-54 BC001768:-55 U25034:-56 AK312069:-64 ENST00000346199.2:-98 uc002xhe.4:-98 ENST00000062104.3:-102 uc002xhd.4:-102 NM_005386:-112 NM_181689:-112
+
|all_trans=HGNC:7860
 
|chr=chr20
 
|chr=chr20
 
|cpg_percent=0.1
 
|cpg_percent=0.1
 
|distance=2
 
|distance=2
|distance_to_tss=117
+
|distance_to_tss=73
 
|end=37521330
 
|end=37521330
 
|end_of_center_position=37521324
 
|end_of_center_position=37521324
Line 19: Line 19:
 
|hgnc_mgi_id=HGNC:7860
 
|hgnc_mgi_id=HGNC:7860
 
|nearest_ensembl=ENSG00000053438
 
|nearest_ensembl=ENSG00000053438
|nearest_promoter_id=NM_001322802
+
|nearest_promoter_id=NM_005386
 
|nearest_refseq=NM_005386
 
|nearest_refseq=NM_005386
 
|nearest_unigene=Hs.504703
 
|nearest_unigene=Hs.504703
|num_trans=12
+
|num_trans=4826
 
|species=human
 
|species=human
 
|start=37521316
 
|start=37521316

Latest revision as of 00:14, 21 July 2021

Basic information about the TSS


TSS ID:hg_184505.1
Species:human
Chr:chr20
TSS Classification:yes
Start:37521316
End:37521330
Strand:+
TSS Score:1
Start of the center position in the TSS region:37521323
End of the center position in the TSS region:37521324



Gene and protein annotation


Transcript_name:BT019426
Distance:2
GeneID:4826
HGNC/MGI_ID:HGNC:7860
UniProt_ID:
Gene_name:neuronatin
Gene_symbol:NNAT
Gene_synonyms:Peg5
Gene_source:HGNC:7860



Transcript annotation


Transcript_name:BT019426
Distance:2
Num_trans:4826
All_trans:HGNC:7860



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NM_005386
Entrez ID:4826
Nearest Unigene:Hs.504703
Nearest Refseq:NM_005386
Nearest Ensembl:ENSG00000053438
Gene Name:neuronatin
Gene Alias:Peg5
Gene Description:neuronatin
Gene Type:protein-coding
CpG%:0.1
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):