Difference between revisions of "TSS:Mm 99715.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:105047 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 9: | Line 9: | ||
|entrez_id=19184 | |entrez_id=19184 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=mSUG1 | + | |gene_alias=Rpt6{{!}}mSUG1 |
| − | |gene_description= | + | |gene_description=protease (prosome, macropain) 26S subunit, ATPase 5 |
|gene_id=19184 | |gene_id=19184 | ||
| − | |gene_name= | + | |gene_name=protease (prosome, macropain) 26S subunit, ATPase 5 |
|gene_source=MGI:105047 | |gene_source=MGI:105047 | ||
|gene_symbol=Psmc5 | |gene_symbol=Psmc5 | ||
| − | |gene_synonyms=mSUG1 | + | |gene_synonyms=Rpt6 mSUG1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:105047 | |hgnc_mgi_id=MGI:105047 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_008950 | |nearest_refseq=NM_008950 | ||
|nearest_unigene=Mm.272361 | |nearest_unigene=Mm.272361 | ||
| − | |num_trans= | + | |num_trans=19184 |
|species=mouse | |species=mouse | ||
|start=106256173 | |start=106256173 | ||
|start_of_center_position=106256181 | |start_of_center_position=106256181 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK135451 AK145703 Z54219 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99715.1 | |tss_id=mm_99715.1 | ||
Latest revision as of 19:32, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 106256181 |
|---|---|
| End of the center position in the TSS region: | 106256182 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK135451 AK145703 Z54219 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19184 |
| All_trans: | MGI:105047 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_008950 |
| Entrez ID: | 19184 |
| Nearest Unigene: | Mm.272361 |
| Nearest Refseq: | NM_008950 |
| Nearest Ensembl: | ENSMUSG00000020708 |
| Gene Name: | protease (prosome, macropain) 26S subunit, ATPase 5 |
| Gene Alias: | Rpt6|mSUG1 |
| Gene Description: | protease (prosome, macropain) 26S subunit, ATPase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
