Difference between revisions of "TSS:Mm 99773.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1916316 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance=- | + | |distance=-370 |
|distance_to_tss=-2161 | |distance_to_tss=-2161 | ||
|end=107026073 | |end=107026073 | ||
| Line 9: | Line 9: | ||
|entrez_id=69066 | |entrez_id=69066 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=RIKEN cDNA 1810010H24 gene | |gene_description=RIKEN cDNA 1810010H24 gene | ||
| − | |gene_id= | + | |gene_id=69066 |
|gene_name=RIKEN cDNA 1810010H24 gene | |gene_name=RIKEN cDNA 1810010H24 gene | ||
|gene_source=MGI:1916316 | |gene_source=MGI:1916316 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001163473 | |nearest_refseq=NM_001163473 | ||
|nearest_unigene=Mm.40679 | |nearest_unigene=Mm.40679 | ||
| − | |num_trans= | + | |num_trans=69066 |
|species=mouse | |species=mouse | ||
|start=107026050 | |start=107026050 | ||
|start_of_center_position=107026061 | |start_of_center_position=107026061 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000140447. | + | |transcript_name=ENSMUST00000140447.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99773.1 | |tss_id=mm_99773.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q08AU9 |
}} | }} | ||
Latest revision as of 19:33, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 107026061 |
|---|---|
| End of the center position in the TSS region: | 107026062 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000140447.3 |
|---|---|
| Distance: | -370 |
| Num_trans: | 69066 |
| All_trans: | MGI:1916316 |
TATA-Box annotation
| Distance to TSS: | -2161 |
|---|---|
| Nearest PromoterID: | NM_001163473 |
| Entrez ID: | 69066 |
| Nearest Unigene: | Mm.40679 |
| Nearest Refseq: | NM_001163473 |
| Nearest Ensembl: | ENSMUSG00000078607 |
| Gene Name: | RIKEN cDNA 1810010H24 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 1810010H24 gene |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
