Difference between revisions of "TSS:Hg 187385.1"
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{{TSSDetail | {{TSSDetail | ||
|WAP1= | |WAP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:20477 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|dJ211D12.5= | |dJ211D12.5= | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=45115179 | |end=45115179 | ||
|end_of_center_position=45115165 | |end_of_center_position=45115165 | ||
|entrez_id=149708 | |entrez_id=149708 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=PRG5 | + | |gene_alias=PRG5{{!}}WAP1{{!}}dJ211D12.5 |
|gene_description=WAP four-disulfide core domain 5 | |gene_description=WAP four-disulfide core domain 5 | ||
|gene_id=149708 | |gene_id=149708 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_145652 | |nearest_refseq=NM_145652 | ||
|nearest_unigene=Hs.375031 | |nearest_unigene=Hs.375031 | ||
| − | |num_trans= | + | |num_trans=149708 |
|species=human | |species=human | ||
|start=45115149 | |start=45115149 | ||
|start_of_center_position=45115164 | |start_of_center_position=45115164 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000307971.7 ENST00000372789.5 | + | |transcript_name=ENST00000307971.7 ENST00000372789.5 AY358822 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_187385.1 | |tss_id=hg_187385.1 | ||
Latest revision as of 01:16, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 45115164 |
|---|---|
| End of the center position in the TSS region: | 45115165 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000307971.7 ENST00000372789.5 AY358822 |
|---|---|
| Distance: | 0 |
| Num_trans: | 149708 |
| All_trans: | HGNC:20477 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_145652 |
| Entrez ID: | 149708 |
| Nearest Unigene: | Hs.375031 |
| Nearest Refseq: | NM_145652 |
| Nearest Ensembl: | ENSG00000175121 |
| Gene Name: | WAP four-disulfide core domain 5 |
| Gene Alias: | PRG5|WAP1|dJ211D12.5 |
| Gene Description: | WAP four-disulfide core domain 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
