Difference between revisions of "TSS:Mm 99802.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|AW491861= | |AW491861= | ||
| − | |all_trans= | + | |all_trans=MGI:3650132 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-1 | |distance=-1 | ||
| − | |distance_to_tss= | + | |distance_to_tss=834 |
|end=107793877 | |end=107793877 | ||
|end_of_center_position=107793872 | |end_of_center_position=107793872 | ||
|entrez_id=54377 | |entrez_id=54377 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=AI413107 | + | |gene_alias=AI413107{{!}}AW491861 |
| − | |gene_description= | + | |gene_description=calcium channel, voltage-dependent, gamma subunit 4 |
| − | |gene_id= | + | |gene_id=108167931 |
|gene_name=predicted gene 11650 | |gene_name=predicted gene 11650 | ||
|gene_source=MGI:3650132 | |gene_source=MGI:3650132 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_019431 | |nearest_refseq=NM_019431 | ||
|nearest_unigene=Mm.103724 | |nearest_unigene=Mm.103724 | ||
| − | |num_trans= | + | |num_trans=108167931 |
|species=mouse | |species=mouse | ||
|start=107793866 | |start=107793866 | ||
|start_of_center_position=107793871 | |start_of_center_position=107793871 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000141271 | + | |transcript_name=ENSMUST00000141271.1 AK048292 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99802.1 | |tss_id=mm_99802.1 | ||
Latest revision as of 19:34, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 107793871 |
|---|---|
| End of the center position in the TSS region: | 107793872 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000141271.1 AK048292 |
|---|---|
| Distance: | -1 |
| Num_trans: | 108167931 |
| All_trans: | MGI:3650132 |
TATA-Box annotation
| Distance to TSS: | 834 |
|---|---|
| Nearest PromoterID: | NM_019431 |
| Entrez ID: | 54377 |
| Nearest Unigene: | Mm.103724 |
| Nearest Refseq: | NM_019431 |
| Nearest Ensembl: | ENSMUSG00000020723 |
| Gene Name: | predicted gene 11650 |
| Gene Alias: | AI413107|AW491861 |
| Gene Description: | calcium channel, voltage-dependent, gamma subunit 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
