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Difference between revisions of "TSS:Mm 100016.1"

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Line 6: Line 6:
 
|MMAC8=
 
|MMAC8=
 
|Pigr4=
 
|Pigr4=
|all_trans=AB095675:16 BC139296:-80 BC139297:-80 ENSMUST00000153245.1:91 AB091765:100 AB091766:116 AB065156:119 ENSMUST00000106582.8:-144 ENSMUST00000045151.5:-144 NM_170758:-144 uc007mfy.1:-144 uc007mfz.1:-144 AK045869:-144 AK053160:151 AY457054:162
+
|all_trans=MGI:2443411
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 15: Line 15:
 
|entrez_id=217303
 
|entrez_id=217303
 
|gc_percent=0.552239
 
|gc_percent=0.552239
|gene_alias=B230315M08Rik
+
|gene_alias=B230315M08Rik{{!}}Clm8{{!}}LMIR1{{!}}MAIR-1{{!}}MAIR-I{{!}}MAIR-Ia{{!}}MMAC8{{!}}Pigr4{{!}}mcpir1
 
|gene_description=CD300A molecule
 
|gene_description=CD300A molecule
 
|gene_id=217303
 
|gene_id=217303
|gene_name=CD300A antigen
+
|gene_name=CD300A molecule
 
|gene_source=MGI:2443411
 
|gene_source=MGI:2443411
 
|gene_symbol=Cd300a
 
|gene_symbol=Cd300a
Line 29: Line 29:
 
|nearest_refseq=NM_170758
 
|nearest_refseq=NM_170758
 
|nearest_unigene=Mm.294439
 
|nearest_unigene=Mm.294439
|num_trans=15
+
|num_trans=217303
 
|species=mouse
 
|species=mouse
 
|start=114890184
 
|start=114890184

Latest revision as of 10:29, 26 July 2021

Basic information about the TSS


TSS ID:mm_100016.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:114890184
End:114890203
Strand:+
TSS Score:1
Start of the center position in the TSS region:114890193
End of the center position in the TSS region:114890194



Gene and protein annotation


Transcript_name:AB095675
Distance:16
GeneID:217303
HGNC/MGI_ID:MGI:2443411
UniProt_ID:
Gene_name:CD300A molecule
Gene_symbol:Cd300a
Gene_synonyms:B230315M08Rik Clm8 LMIR1 MAIR-I MMAC8 Pigr4
Gene_source:MGI:2443411



Transcript annotation


Transcript_name:AB095675
Distance:16
Num_trans:217303
All_trans:MGI:2443411



TATA-Box annotation


Distance to TSS:153
Nearest PromoterID:NM_170758
Entrez ID:217303
Nearest Unigene:Mm.294439
Nearest Refseq:NM_170758
Nearest Ensembl:ENSMUSG00000034652
Gene Name:CD300A molecule
Gene Alias:B230315M08Rik|Clm8|LMIR1|MAIR-1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1
Gene Description:CD300A molecule
Gene Type:protein-coding
CpG%:0.045
GC%:0.552239
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):