Difference between revisions of "TSS:Mm 100052.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1349482 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=353 | |distance=353 | ||
| − | |distance_to_tss= | + | |distance_to_tss=6800 |
|end=115180040 | |end=115180040 | ||
|end_of_center_position=115180034 | |end_of_center_position=115180034 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=1110028N05Rik | |gene_alias=1110028N05Rik | ||
| − | |gene_description= | + | |gene_description=N-acetyltransferase 9 (GCN5-related, putative) |
|gene_id=26941 | |gene_id=26941 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
|gene_source=MGI:1349482 | |gene_source=MGI:1349482 | ||
|gene_symbol=Slc9a3r1 | |gene_symbol=Slc9a3r1 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1349482 | |hgnc_mgi_id=MGI:1349482 | ||
|nearest_ensembl=ENSMUSG00000015542 | |nearest_ensembl=ENSMUSG00000015542 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001362892 |
|nearest_refseq=NM_025400 | |nearest_refseq=NM_025400 | ||
|nearest_unigene=Mm.86823 | |nearest_unigene=Mm.86823 | ||
| − | |num_trans= | + | |num_trans=26941 |
|species=mouse | |species=mouse | ||
|start=115180027 | |start=115180027 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK040371 | |transcript_name=AK040371 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_100052.1 | |tss_id=mm_100052.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 10:29, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115180033 |
|---|---|
| End of the center position in the TSS region: | 115180034 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK040371 |
|---|---|
| Distance: | 353 |
| Num_trans: | 26941 |
| All_trans: | MGI:1349482 |
TATA-Box annotation
| Distance to TSS: | 6800 |
|---|---|
| Nearest PromoterID: | NM_001362892 |
| Entrez ID: | 66176 |
| Nearest Unigene: | Mm.86823 |
| Nearest Refseq: | NM_025400 |
| Nearest Ensembl: | ENSMUSG00000015542 |
| Gene Name: | solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 |
| Gene Alias: | 1110028N05Rik |
| Gene Description: | N-acetyltransferase 9 (GCN5-related, putative) |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
