Difference between revisions of "TSS:Hg 232789.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=CU688733:-8 MN309231:-152 |
| − | |chr= | + | |chr=chr11 |
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-8 |
|distance_to_tss=-146 | |distance_to_tss=-146 | ||
| − | |end= | + | |end=17074462 |
|end_of_center_position=17074452 | |end_of_center_position=17074452 | ||
|entrez_id=476 | |entrez_id=476 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias= | + | |gene_alias=CMT2DD{{!}}HOMGSMR2 |
|gene_description=ATPase Na+/K+ transporting subunit alpha 1 | |gene_description=ATPase Na+/K+ transporting subunit alpha 1 | ||
|gene_id=476 | |gene_id=476 | ||
| − | |gene_name= | + | |gene_name=ATP1A1 |
|gene_source=HGNC:799 | |gene_source=HGNC:799 | ||
|gene_symbol=ATP1A1 | |gene_symbol=ATP1A1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000701 | |nearest_refseq=NM_000701 | ||
|nearest_unigene=Hs.371889 | |nearest_unigene=Hs.371889 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
| − | |start= | + | |start=17074441 |
|start_of_center_position=17074451 | |start_of_center_position=17074451 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=CU688733 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232789.1 | |tss_id=hg_232789.1 | ||
Latest revision as of 08:45, 14 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17074451 |
|---|---|
| End of the center position in the TSS region: | 17074452 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | CU688733 |
|---|---|
| Distance: | -8 |
| Num_trans: | 2 |
| All_trans: | CU688733:-8 MN309231:-152 |
TATA-Box annotation
| Distance to TSS: | -146 |
|---|---|
| Nearest PromoterID: | NM_001160234 |
| Entrez ID: | 476 |
| Nearest Unigene: | Hs.371889 |
| Nearest Refseq: | NM_000701 |
| Nearest Ensembl: | ENSG00000163399 |
| Gene Name: | ATP1A1 |
| Gene Alias: | CMT2DD|HOMGSMR2 |
| Gene Description: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
