Difference between revisions of "TSS:Hg 238783.1"
From referenceTSS
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| Line 3: | Line 3: | ||
|chr=chr21 | |chr=chr21 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-4 | |distance_to_tss=-4 | ||
| − | |end= | + | |end=8260620 |
|end_of_center_position=8260619 | |end_of_center_position=8260619 | ||
|entrez_id=100008589 | |entrez_id=100008589 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=RN28S1 | + | |gene_alias=RN28S1{{!}}RNA28S5 |
| − | |gene_description= | + | |gene_description=RNA, 28S ribosomal N5 |
|gene_id=100008589 | |gene_id=100008589 | ||
| − | |gene_name= | + | |gene_name=RNA28SN5 |
|gene_source=HGNC:37659 | |gene_source=HGNC:37659 | ||
|gene_symbol=RNA28S5 | |gene_symbol=RNA28S5 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_003287 | |nearest_refseq=NR_003287 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=8260617 |
|start_of_center_position=8260618 | |start_of_center_position=8260618 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_238783.1 | |tss_id=hg_238783.1 | ||
Latest revision as of 11:04, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 8260618 |
|---|---|
| End of the center position in the TSS region: | 8260619 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | NR_003287:0 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NR_003287 |
| Entrez ID: | 100008589 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_003287 |
| Nearest Ensembl: | |
| Gene Name: | RNA28SN5 |
| Gene Alias: | RN28S1|RNA28S5 |
| Gene Description: | RNA, 28S ribosomal N5 |
| Gene Type: | rRNA |
| CpG%: | 0.145 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
