Difference between revisions of "TSS:Hg 107368.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |PPAPDC1= | ||
| + | |PPAPDC1A= | ||
| + | |all_trans=NR_134516:-1 NM_001318169:-1 NM_001318168:-1 NM_001318167:-1 NM_001318166:-1 BC101267:112 BC101269:112 BC122535:112 BC101268:112 BC132787:172 ENST00000398250.6:268 NM_001030059:268 AK296273:288 HQ258170:342 KJ895775:342 KJ903972:342 AK310178:344 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-1 | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
| + | |end=120456959 | ||
| + | |end_of_center_position=120456957 | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| − | |gene_alias=DPPL2 | + | |gene_alias=DPPL2{{!}}PPAPDC1{{!}}PPAPDC1A |
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
| − | |gene_name=PLPP4 | + | |gene_id=196051 |
| + | |gene_name=phospholipid phosphatase 4 | ||
| + | |gene_source=HGNC:23531 | ||
| + | |gene_symbol=PLPP4 | ||
| + | |gene_synonyms=DPPL2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23531 | ||
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001030059 |
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=120456954 | ||
| + | |start_of_center_position=120456956 | ||
| + | |strand=+ | ||
| + | |transcript_name=NR_134516.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_107368.1 | |tss_id=hg_107368.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VZY2 | ||
}} | }} | ||
Latest revision as of 20:13, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 120456956 |
|---|---|
| End of the center position in the TSS region: | 120456957 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_134516.1 |
|---|---|
| Distance: | -1 |
| Num_trans: | 17 |
| All_trans: | NR_134516:-1 NM_001318169:-1 NM_001318168:-1 NM_001318167:-1 NM_001318166:-1 BC101267:112 BC101269:112 BC122535:112 BC101268:112 BC132787:172 ENST00000398250.6:268 NM_001030059:268 AK296273:288 HQ258170:342 KJ895775:342 KJ903972:342 AK310178:344 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001030059 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | phospholipid phosphatase 4 |
| Gene Alias: | DPPL2|PPAPDC1|PPAPDC1A |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
