Difference between revisions of "TSS:Mm 110712.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|AW496366= | |AW496366= | ||
| − | |all_trans= | + | |all_trans=MGI:3642578 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| Line 10: | Line 10: | ||
|entrez_id=11845 | |entrez_id=11845 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=AI788669 | + | |gene_alias=AI788669{{!}}AW496366 |
|gene_description=ADP-ribosylation factor 6 | |gene_description=ADP-ribosylation factor 6 | ||
|gene_id=100036526 | |gene_id=100036526 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_007481 | |nearest_refseq=NM_007481 | ||
|nearest_unigene=Mm.27308 | |nearest_unigene=Mm.27308 | ||
| − | |num_trans= | + | |num_trans=100036526 |
|species=mouse | |species=mouse | ||
|start=69372443 | |start=69372443 | ||
|start_of_center_position=69372491 | |start_of_center_position=69372491 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000238276.1 ENSMUST00000053451.1 AK017126 AK015077 AK016848 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_110712.1 | |tss_id=mm_110712.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9CUA2 Q9CUQ2 |
}} | }} | ||
Latest revision as of 14:24, 26 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 69372491 |
|---|---|
| End of the center position in the TSS region: | 69372492 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000238276.1 ENSMUST00000053451.1 AK017126 AK015077 AK016848 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100036526 |
| All_trans: | MGI:3642578 |
TATA-Box annotation
| Distance to TSS: | 342 |
|---|---|
| Nearest PromoterID: | NM_007481 |
| Entrez ID: | 11845 |
| Nearest Unigene: | Mm.27308 |
| Nearest Refseq: | NM_007481 |
| Nearest Ensembl: | ENSMUSG00000044147 |
| Gene Name: | predicted gene 9887 |
| Gene Alias: | AI788669|AW496366 |
| Gene Description: | ADP-ribosylation factor 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
