Difference between revisions of "TSS:Hg 233307.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=LF345039:33 MA580616:33 LF345038:-221 MA580615:-221 AF035284:243 |
| − | |chr= | + | |chr=chr11 |
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=33 |
| − | |distance_to_tss=- | + | |distance_to_tss=-5422 |
| − | |end= | + | |end=61802227 |
|end_of_center_position=61802227 | |end_of_center_position=61802227 | ||
|entrez_id=2207 | |entrez_id=2207 | ||
| Line 12: | Line 12: | ||
|gene_description=Fc fragment of IgE receptor Ig | |gene_description=Fc fragment of IgE receptor Ig | ||
|gene_id=4720 | |gene_id=4720 | ||
| − | |gene_name= | + | |gene_name=FCER1G |
|gene_source=HGNC:7708 | |gene_source=HGNC:7708 | ||
|gene_symbol=NDUFS2 | |gene_symbol=NDUFS2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_004106 | |nearest_refseq=NM_004106 | ||
|nearest_unigene=Hs.433300 | |nearest_unigene=Hs.433300 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
| − | |start= | + | |start=61802225 |
|start_of_center_position=61802226 | |start_of_center_position=61802226 | ||
| − | |strand= | + | |strand=- |
| − | |transcript_name= | + | |transcript_name=LF345039 MA580616 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233307.1 | |tss_id=hg_233307.1 | ||
Latest revision as of 08:57, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 61802226 |
|---|---|
| End of the center position in the TSS region: | 61802227 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF345039 MA580616 |
|---|---|
| Distance: | 33 |
| Num_trans: | 5 |
| All_trans: | LF345039:33 MA580616:33 LF345038:-221 MA580615:-221 AF035284:243 |
TATA-Box annotation
| Distance to TSS: | -5422 |
|---|---|
| Nearest PromoterID: | NM_004106 |
| Entrez ID: | 2207 |
| Nearest Unigene: | Hs.433300 |
| Nearest Refseq: | NM_004106 |
| Nearest Ensembl: | ENSG00000158869 |
| Gene Name: | FCER1G |
| Gene Alias: | FCRG |
| Gene Description: | Fc fragment of IgE receptor Ig |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
