Difference between revisions of "TSS:Hg 217979.1"
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{{TSSDetail | {{TSSDetail | ||
|MKRN2-AS1= | |MKRN2-AS1= | ||
| − | |all_trans=NM_001195279: | + | |all_trans=NM_001195279:-13 NM_001378011:-13 NM_001378009:-13 NM_001378010:-13 ENST00000561645.2:-36 ENST00000564146.3:-70 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=-13 |
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
|end=12545486 | |end=12545486 | ||
| Line 10: | Line 10: | ||
|entrez_id=100129480 | |entrez_id=100129480 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=C3orf83 | + | |gene_alias=C3orf83{{!}}MKRN2-AS1 |
|gene_description=MKRN2 opposite strand | |gene_description=MKRN2 opposite strand | ||
|gene_id=100129480 | |gene_id=100129480 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001195279 | |nearest_refseq=NM_001195279 | ||
|nearest_unigene=Hs.572974 | |nearest_unigene=Hs.572974 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=12545485 | |start=12545485 | ||
|start_of_center_position=12545485 | |start_of_center_position=12545485 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001195279 | + | |transcript_name=NM_001195279.2 NM_001378009.1 NM_001378010.1 NM_001378011.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_217979.1 | |tss_id=hg_217979.1 | ||
Latest revision as of 07:02, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 12545485 |
|---|---|
| End of the center position in the TSS region: | 12545486 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001195279.2 NM_001378009.1 NM_001378010.1 NM_001378011.1 |
|---|---|
| Distance: | -13 |
| Num_trans: | 6 |
| All_trans: | NM_001195279:-13 NM_001378011:-13 NM_001378009:-13 NM_001378010:-13 ENST00000561645.2:-36 ENST00000564146.3:-70 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NM_001195279 |
| Entrez ID: | 100129480 |
| Nearest Unigene: | Hs.572974 |
| Nearest Refseq: | NM_001195279 |
| Nearest Ensembl: | ENSG00000225526 |
| Gene Name: | MKRN2 opposite strand |
| Gene Alias: | C3orf83|MKRN2-AS1 |
| Gene Description: | MKRN2 opposite strand |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
