Difference between revisions of "TSS:Hg 157189.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000562591.1:-353 uc002edy.4:-353 BC038761:-353 |chr=chr16 |cpg_percent=0.045 |distance=-353 |distance_to_tss=1073 |end=35506109 |entrez_id=1001307...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000669868.1:-3 ENST00000667946.1:-109 ENST00000656785.1:-132 ENST00000562591.1:-353 BC038761:-353 ENST00000658117.1:373 ENST00000666603.1:-374 ENST00000664405.1:-378 ENST00000653340.1:-378 ENST00000662587.1:-458 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance=- | + | |distance=-3 |
|distance_to_tss=1073 | |distance_to_tss=1073 | ||
|end=35506109 | |end=35506109 | ||
| + | |end_of_center_position=35506097 | ||
|entrez_id=100130700 | |entrez_id=100130700 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=TP53 target 3 family member H, pseudogene |
|gene_id=100130700 | |gene_id=100130700 | ||
| − | |gene_name= | + | |gene_name=TP53TG3HP |
|gene_source=HGNC:51819 | |gene_source=HGNC:51819 | ||
|gene_symbol=TP53TG3HP | |gene_symbol=TP53TG3HP | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:51819 | |hgnc_mgi_id=HGNC:51819 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_034018 |
|nearest_refseq=NR_034018 | |nearest_refseq=NR_034018 | ||
|nearest_unigene=Hs.97712 | |nearest_unigene=Hs.97712 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=35506084 | |start=35506084 | ||
| + | |start_of_center_position=35506096 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000669868.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_157189.1 | |tss_id=hg_157189.1 | ||
Latest revision as of 14:14, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35506096 |
|---|---|
| End of the center position in the TSS region: | 35506097 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000669868.1 |
|---|---|
| Distance: | -3 |
| Num_trans: | 10 |
| All_trans: | ENST00000669868.1:-3 ENST00000667946.1:-109 ENST00000656785.1:-132 ENST00000562591.1:-353 BC038761:-353 ENST00000658117.1:373 ENST00000666603.1:-374 ENST00000664405.1:-378 ENST00000653340.1:-378 ENST00000662587.1:-458 |
TATA-Box annotation
| Distance to TSS: | 1073 |
|---|---|
| Nearest PromoterID: | NR_034018 |
| Entrez ID: | 100130700 |
| Nearest Unigene: | Hs.97712 |
| Nearest Refseq: | NR_034018 |
| Nearest Ensembl: | |
| Gene Name: | TP53TG3HP |
| Gene Alias: | - |
| Gene Description: | TP53 target 3 family member H, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.045 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
