Difference between revisions of "TSS:Hg 158961.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001145536:0 AK128415:0 AK309386:-76 ENST00000381365.3:-112 uc002fzl.4:-112 ENST00000521575.1:-230 uc010ckr.4:-230 AK308530:-230 |chr=chr17 |cpg_perce...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:37238 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=119 |
|end=4899663 | |end=4899663 | ||
| + | |end_of_center_position=4899656 | ||
|entrez_id=100130311 | |entrez_id=100130311 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001145536 | |nearest_refseq=NM_001145536 | ||
|nearest_unigene=Hs.579243 | |nearest_unigene=Hs.579243 | ||
| − | |num_trans= | + | |num_trans=100130311 |
|species=human | |species=human | ||
|start=4899647 | |start=4899647 | ||
| + | |start_of_center_position=4899655 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK128415 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_158961.1 | |tss_id=hg_158961.1 | ||
Latest revision as of 14:57, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 4899655 |
|---|---|
| End of the center position in the TSS region: | 4899656 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK128415 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100130311 |
| All_trans: | HGNC:37238 |
TATA-Box annotation
| Distance to TSS: | 119 |
|---|---|
| Nearest PromoterID: | NM_001145536 |
| Entrez ID: | 100130311 |
| Nearest Unigene: | Hs.579243 |
| Nearest Refseq: | NM_001145536 |
| Nearest Ensembl: | ENSG00000205710 |
| Gene Name: | chromosome 17 open reading frame 107 |
| Gene Alias: | - |
| Gene Description: | chromosome 17 open reading frame 107 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
