Difference between revisions of "TSS:Hg 40712.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|ACK-1= | |ACK-1= | ||
|ACK1= | |ACK1= | ||
| − | |all_trans= | + | |all_trans=HGNC:49093 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-23 | |distance=-23 | ||
| − | |distance_to_tss= | + | |distance_to_tss=32 |
|end=195908117 | |end=195908117 | ||
|end_of_center_position=195908108 | |end_of_center_position=195908108 | ||
| − | |entrez_id= | + | |entrez_id=100128262 |
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=TNK2 antisense RNA 1 |
|gene_id=100128262 | |gene_id=100128262 | ||
|gene_name=TNK2 antisense RNA 1 | |gene_name=TNK2 antisense RNA 1 | ||
| Line 18: | Line 18: | ||
|gene_symbol=TNK2-AS1 | |gene_symbol=TNK2-AS1 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=HGNC:49093 | |hgnc_mgi_id=HGNC:49093 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_145450 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_145450 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.605240 |
| − | |num_trans= | + | |num_trans=100128262 |
|p21cdc42Hs= | |p21cdc42Hs= | ||
|species=human | |species=human | ||
| Line 30: | Line 30: | ||
|start_of_center_position=195908107 | |start_of_center_position=195908107 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000458180 | + | |transcript_name=ENST00000458180.1 AK127609 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_40712.1 | |tss_id=hg_40712.1 | ||
Latest revision as of 21:17, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 195908107 |
|---|---|
| End of the center position in the TSS region: | 195908108 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000458180.1 AK127609 |
|---|---|
| Distance: | -23 |
| Num_trans: | 100128262 |
| All_trans: | HGNC:49093 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NR_145450 |
| Entrez ID: | 100128262 |
| Nearest Unigene: | Hs.605240 |
| Nearest Refseq: | NR_145450 |
| Nearest Ensembl: | |
| Gene Name: | TNK2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | TNK2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
