Difference between revisions of "TSS:Hg 240753.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:19012 |
| − | |chr= | + | |chr=chr4 |
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-12 |
|distance_to_tss=-10 | |distance_to_tss=-10 | ||
| − | |end= | + | |end=47790248 |
|end_of_center_position=47790248 | |end_of_center_position=47790248 | ||
|entrez_id=79310 | |entrez_id=79310 | ||
| Line 11: | Line 11: | ||
|gene_alias=OR3-10 | |gene_alias=OR3-10 | ||
|gene_description=olfactory receptor family 5 subfamily H member 2 | |gene_description=olfactory receptor family 5 subfamily H member 2 | ||
| − | |gene_id= | + | |gene_id=10699 |
| − | |gene_name= | + | |gene_name=corin, serine peptidase |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:19012 |
| − | |gene_symbol= | + | |gene_symbol=CORIN |
| − | |gene_synonyms= | + | |gene_synonyms=ATC2 CRN Lrp4 PRSC TMPRSS10 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:19012 |
|nearest_ensembl=ENSG00000197938 | |nearest_ensembl=ENSG00000197938 | ||
|nearest_promoter_id=NM_001005482 | |nearest_promoter_id=NM_001005482 | ||
|nearest_refseq=NM_001005482 | |nearest_refseq=NM_001005482 | ||
|nearest_unigene=Hs.554711 | |nearest_unigene=Hs.554711 | ||
| − | |num_trans= | + | |num_trans=10699 |
|species=human | |species=human | ||
| − | |start= | + | |start=47790247 |
|start_of_center_position=47790247 | |start_of_center_position=47790247 | ||
| − | |strand= | + | |strand=- |
| − | |transcript_name= | + | |transcript_name=ENST00000508498.5 AK302816 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_240753.1 | |tss_id=hg_240753.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B4DZA3 E7EQE7 |
}} | }} | ||
Latest revision as of 14:11, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 47790247 |
|---|---|
| End of the center position in the TSS region: | 47790248 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000508498.5 AK302816 |
|---|---|
| Distance: | -12 |
| Num_trans: | 10699 |
| All_trans: | HGNC:19012 |
TATA-Box annotation
| Distance to TSS: | -10 |
|---|---|
| Nearest PromoterID: | NM_001005482 |
| Entrez ID: | 79310 |
| Nearest Unigene: | Hs.554711 |
| Nearest Refseq: | NM_001005482 |
| Nearest Ensembl: | ENSG00000197938 |
| Gene Name: | corin, serine peptidase |
| Gene Alias: | OR3-10 |
| Gene Description: | olfactory receptor family 5 subfamily H member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
