Difference between revisions of "TSS:Hg 16398.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK123024:-24 uc001gse.2:-81 AB111893:-81 ENST00000367462.4:-334 NM_199051:-334 |chr=chr1 |cpg_percent=0.005 |distance=-24 |distance_to_tss=342 |end=1904...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |DBCCR1L1= |
| + | |FAM5C= | ||
| + | |all_trans=HGNC:22393 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-24 | |distance=-24 | ||
| − | |distance_to_tss= | + | |distance_to_tss=324 |
|end=190477548 | |end=190477548 | ||
| + | |end_of_center_position=190477541 | ||
|entrez_id=339479 | |entrez_id=339479 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=DBCCR1L | + | |gene_alias=DBCCR1L{{!}}DBCCR1L1{{!}}FAM5C |
|gene_description=BMP/retinoic acid inducible neural specific 3 | |gene_description=BMP/retinoic acid inducible neural specific 3 | ||
|gene_id=339479 | |gene_id=339479 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_199051 | |nearest_refseq=NM_199051 | ||
|nearest_unigene=Hs.65765 | |nearest_unigene=Hs.65765 | ||
| − | |num_trans= | + | |num_trans=339479 |
|species=human | |species=human | ||
|start=190477532 | |start=190477532 | ||
| + | |start_of_center_position=190477540 | ||
|strand=- | |strand=- | ||
|transcript_name=AK123024 | |transcript_name=AK123024 | ||
Latest revision as of 16:46, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 190477540 |
|---|---|
| End of the center position in the TSS region: | 190477541 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK123024 |
|---|---|
| Distance: | -24 |
| Num_trans: | 339479 |
| All_trans: | HGNC:22393 |
TATA-Box annotation
| Distance to TSS: | 324 |
|---|---|
| Nearest PromoterID: | NM_199051 |
| Entrez ID: | 339479 |
| Nearest Unigene: | Hs.65765 |
| Nearest Refseq: | NM_199051 |
| Nearest Ensembl: | ENSG00000162670 |
| Gene Name: | BMP/retinoic acid inducible neural specific 3 |
| Gene Alias: | DBCCR1L|DBCCR1L1|FAM5C |
| Gene Description: | BMP/retinoic acid inducible neural specific 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
