Difference between revisions of "TSS:Hg 16399.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK123024:0 uc001gse.2:-49 AB111893:-49 ENST00000367462.4:-302 NM_199051:-302 |chr=chr1 |cpg_percent=0.005 |distance=0 |distance_to_tss=308 |end=19047758...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |DBCCR1L1= |
| + | |FAM5C= | ||
| + | |all_trans=HGNC:22393 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=290 |
|end=190477580 | |end=190477580 | ||
| + | |end_of_center_position=190477575 | ||
|entrez_id=339479 | |entrez_id=339479 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=DBCCR1L | + | |gene_alias=DBCCR1L{{!}}DBCCR1L1{{!}}FAM5C |
|gene_description=BMP/retinoic acid inducible neural specific 3 | |gene_description=BMP/retinoic acid inducible neural specific 3 | ||
|gene_id=339479 | |gene_id=339479 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_199051 | |nearest_refseq=NM_199051 | ||
|nearest_unigene=Hs.65765 | |nearest_unigene=Hs.65765 | ||
| − | |num_trans= | + | |num_trans=339479 |
|species=human | |species=human | ||
|start=190477568 | |start=190477568 | ||
| + | |start_of_center_position=190477574 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-99(CCCCATATAAAG,-,0.00),-97(CCATATAAAGCA,+,0.00) |
|transcript_name=AK123024 | |transcript_name=AK123024 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 16:46, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 190477574 |
|---|---|
| End of the center position in the TSS region: | 190477575 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK123024 |
|---|---|
| Distance: | 0 |
| Num_trans: | 339479 |
| All_trans: | HGNC:22393 |
TATA-Box annotation
| Distance to TSS: | 290 |
|---|---|
| Nearest PromoterID: | NM_199051 |
| Entrez ID: | 339479 |
| Nearest Unigene: | Hs.65765 |
| Nearest Refseq: | NM_199051 |
| Nearest Ensembl: | ENSG00000162670 |
| Gene Name: | BMP/retinoic acid inducible neural specific 3 |
| Gene Alias: | DBCCR1L|DBCCR1L1|FAM5C |
| Gene Description: | BMP/retinoic acid inducible neural specific 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -99(CCCCATATAAAG,-,0.00),-97(CCATATAAAGCA,+,0.00) |
