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Difference between revisions of "TSS:Hg 56652.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AY358733:0 ENST00000491184.2:1 uc063dyf.1:1 BC110838:10 AY280614:16 ENST00000448151.2:-33 uc063dye.1:-33 ENST00000409534.1:-49 uc003jte.4:-49 BX649157:-49 ENST00000334994.5:-135 NR_073584:-135 NM_181506:-135 uc011cqs.1:-135 AK123022:-135
+
|all_trans=HGNC:35155
 
|chr=chr5
 
|chr=chr5
 
|cpg_percent=0.015
 
|cpg_percent=0.015
 
|distance=0
 
|distance=0
|distance_to_tss=137
+
|distance_to_tss=53
 
|end=62578874
 
|end=62578874
 
|end_of_center_position=62578872
 
|end_of_center_position=62578872
Line 22: Line 22:
 
|nearest_refseq=NM_181506
 
|nearest_refseq=NM_181506
 
|nearest_unigene=Hs.721348
 
|nearest_unigene=Hs.721348
|num_trans=15
+
|num_trans=100130733
 
|species=human
 
|species=human
 
|start=62578869
 
|start=62578869

Latest revision as of 03:03, 22 July 2021

Basic information about the TSS


TSS ID:hg_56652.1
Species:human
Chr:chr5
TSS Classification:no
Start:62578869
End:62578874
Strand:+
TSS Score:1
Start of the center position in the TSS region:62578871
End of the center position in the TSS region:62578872



Gene and protein annotation


Transcript_name:AY358733
Distance:0
GeneID:100130733
HGNC/MGI_ID:HGNC:35155
UniProt_ID:
Gene_name:leucine rich repeat containing 70
Gene_symbol:LRRC70
Gene_synonyms:LOC100130733 SLRN
Gene_source:HGNC:35155



Transcript annotation


Transcript_name:AY358733
Distance:0
Num_trans:100130733
All_trans:HGNC:35155



TATA-Box annotation


Distance to TSS:53
Nearest PromoterID:NM_181506
Entrez ID:100130733
Nearest Unigene:Hs.721348
Nearest Refseq:NM_181506
Nearest Ensembl:ENSG00000186105
Gene Name:leucine rich repeat containing 70
Gene Alias:SLRN
Gene Description:leucine rich repeat containing 70
Gene Type:protein-coding
CpG%:0.015
GC%:0.343284
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):