Difference between revisions of "TSS:Hg 100657.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=1210 |entrez_id=692094 |gc_percent=0.532338 |gene_alias=PSMP |gene_description="microseminoprotein, prostate associated" |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=CU674847:194 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance_to_tss= | + | |distance=194 |
| + | |distance_to_tss=1209 | ||
| + | |end=35753067 | ||
| + | |end_of_center_position=35753067 | ||
|entrez_id=692094 | |entrez_id=692094 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
|gene_alias=PSMP | |gene_alias=PSMP | ||
| − | |gene_description= | + | |gene_description=microseminoprotein, prostate associated |
|gene_name=MSMP | |gene_name=MSMP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_001044264 | |nearest_refseq=NM_001044264 | ||
|nearest_unigene=Hs.571601 | |nearest_unigene=Hs.571601 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=35753066 | ||
| + | |start_of_center_position=35753066 | ||
| + | |strand=- | ||
| + | |transcript_name=CU674847 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100657.1 | |tss_id=hg_100657.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35753066 |
|---|---|
| End of the center position in the TSS region: | 35753067 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | CU674847 |
|---|---|
| Distance: | 194 |
| Num_trans: | 1 |
| All_trans: | CU674847:194 |
TATA-Box annotation
| Distance to TSS: | 1209 |
|---|---|
| Nearest PromoterID: | NM_001044264 |
| Entrez ID: | 692094 |
| Nearest Unigene: | Hs.571601 |
| Nearest Refseq: | NM_001044264 |
| Nearest Ensembl: | ENSG00000215183 |
| Gene Name: | MSMP |
| Gene Alias: | PSMP |
| Gene Description: | microseminoprotein, prostate associated |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
