Difference between revisions of "TSS:Hg 167059.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000570565.5:0 uc060hpk.1:0 AF288385:0 ENST00000442502.6:-4 NM_001082534:-4 uc002ity.4:-4 ENST00000575181.1:6 uc060hpm.1:6 BC029865:6 ENST000002852...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |CARPX= |
| + | |HUCEP-15= | ||
| + | |all_trans=HGNC:1369 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
|end=52160013 | |end=52160013 | ||
| + | |end_of_center_position=52160001 | ||
|entrez_id=56934 | |entrez_id=56934 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=CA-RPX | + | |gene_alias=CA-RPX{{!}}CARPX{{!}}HUCEP-15 |
|gene_description=carbonic anhydrase 10 | |gene_description=carbonic anhydrase 10 | ||
|gene_id=56934 | |gene_id=56934 | ||
| Line 21: | Line 24: | ||
|nearest_refseq=NM_020178 | |nearest_refseq=NM_020178 | ||
|nearest_unigene=Hs.463466 | |nearest_unigene=Hs.463466 | ||
| − | |num_trans= | + | |num_trans=56934 |
|species=human | |species=human | ||
|start=52159988 | |start=52159988 | ||
| + | |start_of_center_position=52160000 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000570565.5 | + | |transcript_name=ENST00000570565.5 AF288385 GQ901003 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_167059.1 | |tss_id=hg_167059.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q9NS85 | + | |uniprot_id=A0A384MTY8 Q9NS85 |
}} | }} | ||
Latest revision as of 17:54, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 52160000 |
|---|---|
| End of the center position in the TSS region: | 52160001 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000570565.5 AF288385 GQ901003 |
|---|---|
| Distance: | 0 |
| Num_trans: | 56934 |
| All_trans: | HGNC:1369 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001082534 |
| Entrez ID: | 56934 |
| Nearest Unigene: | Hs.463466 |
| Nearest Refseq: | NM_020178 |
| Nearest Ensembl: | ENSG00000154975 |
| Gene Name: | carbonic anhydrase 10 |
| Gene Alias: | CA-RPX|CARPX|HUCEP-15 |
| Gene Description: | carbonic anhydrase 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
