Difference between revisions of "TSS:Hg 71814.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000606627 | + | |all_trans=ENST00000606627.1:-176 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC100130357 | |gene_description=uncharacterized LOC100130357 | ||
| − | |gene_name=LOC100130357 | + | |gene_id=100130357 |
| − | |gene_type= | + | |gene_name=uncharacterized LOC100130357 |
| + | |gene_source=EntrezGene:100130357 | ||
| + | |gene_symbol=LOC100130357 | ||
| + | |gene_synonyms= | ||
| + | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_134859 | |nearest_promoter_id=NR_134859 | ||
|nearest_refseq=NM_001242698 | |nearest_refseq=NM_001242698 | ||
|nearest_unigene=Hs.484678 | |nearest_unigene=Hs.484678 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=13273855 | |start=13273855 | ||
|start_of_center_position=13273869 | |start_of_center_position=13273869 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000606627 | + | |transcript_name=ENST00000606627.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_71814.1 | |tss_id=hg_71814.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 11:20, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13273869 |
|---|---|
| End of the center position in the TSS region: | 13273870 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000606627.1 |
|---|---|
| Distance: | -176 |
| Num_trans: | 1 |
| All_trans: | ENST00000606627.1:-176 |
TATA-Box annotation
| Distance to TSS: | 9573 |
|---|---|
| Nearest PromoterID: | NR_134859 |
| Entrez ID: | 100130357 |
| Nearest Unigene: | Hs.484678 |
| Nearest Refseq: | NM_001242698 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100130357 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130357 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
