Difference between revisions of "TSS:Hg 152874.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000641433.1:-39 NR_132983:-39 LP896006:-39 ENST00000668516.1:-81 ENST00000570945.2:-82 NR_132984:169 ENST00000641175.1:356 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 12: | Line 12: | ||
|gene_description=MIR193B host gene | |gene_description=MIR193B host gene | ||
|gene_id=100129781 | |gene_id=100129781 | ||
| − | |gene_name= | + | |gene_name=MIR193b-365a host gene |
|gene_source=HGNC:51945 | |gene_source=HGNC:51945 | ||
|gene_symbol=MIR193BHG | |gene_symbol=MIR193BHG | ||
| − | |gene_synonyms= | + | |gene_synonyms=lincNORS |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:51945 | |hgnc_mgi_id=HGNC:51945 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_132983 | |nearest_refseq=NR_132983 | ||
|nearest_unigene=Hs.190748 | |nearest_unigene=Hs.190748 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=14302326 | |start=14302326 | ||
|start_of_center_position=14302331 | |start_of_center_position=14302331 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000641433.1 NR_132983 LP896006 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_152874.1 | |tss_id=hg_152874.1 | ||
Revision as of 12:35, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14302331 |
|---|---|
| End of the center position in the TSS region: | 14302332 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000641433.1 NR_132983 LP896006 |
|---|---|
| Distance: | -39 |
| Num_trans: | 7 |
| All_trans: | ENST00000641433.1:-39 NR_132983:-39 LP896006:-39 ENST00000668516.1:-81 ENST00000570945.2:-82 NR_132984:169 ENST00000641175.1:356 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NR_132983 |
| Entrez ID: | 100129781 |
| Nearest Unigene: | Hs.190748 |
| Nearest Refseq: | NR_132983 |
| Nearest Ensembl: | |
| Gene Name: | MIR193b-365a host gene |
| Gene Alias: | - |
| Gene Description: | MIR193B host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
