Difference between revisions of "TSS:Hg 72400.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK309286:-58 | + | |all_trans=ENST00000660873.1:-36 AK309286:-58 ENST00000671586.1:-59 ENST00000667674.1:-62 ENST00000602810.1:-81 BC043177:-81 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance=- | + | |distance=-36 |
|distance_to_tss=536 | |distance_to_tss=536 | ||
|end=28136785 | |end=28136785 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:48982 | |hgnc_mgi_id=HGNC:48982 | ||
|nearest_ensembl=ENSG00000269293 | |nearest_ensembl=ENSG00000269293 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_103456 |
|nearest_refseq=NR_103455 | |nearest_refseq=NR_103455 | ||
|nearest_unigene=Hs.659413 | |nearest_unigene=Hs.659413 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=28136774 | |start=28136774 | ||
|start_of_center_position=28136779 | |start_of_center_position=28136779 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000660873.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_72400.1 | |tss_id=hg_72400.1 | ||
Revision as of 11:34, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28136779 |
|---|---|
| End of the center position in the TSS region: | 28136780 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000660873.1 |
|---|---|
| Distance: | -36 |
| Num_trans: | 6 |
| All_trans: | ENST00000660873.1:-36 AK309286:-58 ENST00000671586.1:-59 ENST00000667674.1:-62 ENST00000602810.1:-81 BC043177:-81 |
TATA-Box annotation
| Distance to TSS: | 536 |
|---|---|
| Nearest PromoterID: | NR_103456 |
| Entrez ID: | 100129195 |
| Nearest Unigene: | Hs.659413 |
| Nearest Refseq: | NR_103455 |
| Nearest Ensembl: | ENSG00000269293 |
| Gene Name: | ZSCAN16 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | ZSCAN16 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
