Difference between revisions of "TSS:Hg 169175.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000549780.5:17 uc060mxz.1:17 |chr=chr18 |cpg_percent=0.085 |distance=17 |distance_to_tss=884 |end=3448482 |entrez_id=7050 |gc_percent=0.696517 |ge...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000549780.5:17 uc060mxz.1:17 | |all_trans=ENST00000549780.5:17 uc060mxz.1:17 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=884 | |distance_to_tss=884 | ||
|end=3448482 | |end=3448482 | ||
| + | |end_of_center_position=3448470 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3448457 | |start=3448457 | ||
| + | |start_of_center_position=3448469 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000549780.5 uc060mxz.1 | |transcript_name=ENST00000549780.5 uc060mxz.1 | ||
Revision as of 08:58, 15 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3448469 |
|---|---|
| End of the center position in the TSS region: | 3448470 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000549780.5 uc060mxz.1 |
|---|---|
| Distance: | 17 |
| Num_trans: | 2 |
| All_trans: | ENST00000549780.5:17 uc060mxz.1:17 |
TATA-Box annotation
| Distance to TSS: | 884 |
|---|---|
| Nearest PromoterID: | NM_173207 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
