Difference between revisions of "TSS:Hg 169178.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000549780.5:-290 uc060mxz.1:-290 |chr=chr18 |cpg_percent=0.05 |distance=-290 |distance_to_tss=-619 |end=3448800 |entrez_id=7050 |gc_percent=0.4726...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000549780.5:-290 uc060mxz.1:-290 | |all_trans=ENST00000549780.5:-290 uc060mxz.1:-290 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-619 | |distance_to_tss=-619 | ||
|end=3448800 | |end=3448800 | ||
| + | |end_of_center_position=3448795 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3448788 | |start=3448788 | ||
| + | |start_of_center_position=3448794 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000549780.5 uc060mxz.1 | |transcript_name=ENST00000549780.5 uc060mxz.1 | ||
Revision as of 08:58, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3448794 |
|---|---|
| End of the center position in the TSS region: | 3448795 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000549780.5 uc060mxz.1 |
|---|---|
| Distance: | -290 |
| Num_trans: | 2 |
| All_trans: | ENST00000549780.5:-290 uc060mxz.1:-290 |
TATA-Box annotation
| Distance to TSS: | -619 |
|---|---|
| Nearest PromoterID: | NM_001278682 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
