Difference between revisions of "TSS:Hg 169182.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000405385.7:32 NM_173209:32 NM_173208:32 NM_001278684:32 uc002klx.5:32 ENST00000551557.1:-52 uc060myb.1:-52 ENST00000343820.9:85 uc002kly.5:85 ENS...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000405385.7:32 NM_173209:32 NM_173208:32 NM_001278684:32 uc002klx.5:32 ENST00000551557.1:-52 uc060myb.1:-52 ENST00000343820.9:85 uc002kly.5:85 ENST00000549253.5:-176 NM_001278682:-176 uc060mya.1:-176 ENST00000407501.6:263 uc002klw.5:263 ENST00000546979.5:417 uc060myc.1:417 | |all_trans=ENST00000405385.7:32 NM_173209:32 NM_173208:32 NM_001278684:32 uc002klx.5:32 ENST00000551557.1:-52 uc060myb.1:-52 ENST00000343820.9:85 uc002kly.5:85 ENST00000549253.5:-176 NM_001278682:-176 uc060mya.1:-176 ENST00000407501.6:263 uc002klw.5:263 ENST00000546979.5:417 uc060myc.1:417 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-47 | |distance_to_tss=-47 | ||
|end=3449619 | |end=3449619 | ||
| + | |end_of_center_position=3449604 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3449588 | |start=3449588 | ||
| + | |start_of_center_position=3449603 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000405385.7 NM_173209 NM_173208 NM_001278684 uc002klx.5 | |transcript_name=ENST00000405385.7 NM_173209 NM_173208 NM_001278684 uc002klx.5 | ||
Revision as of 08:58, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3449603 |
|---|---|
| End of the center position in the TSS region: | 3449604 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000405385.7 NM_173209 NM_173208 NM_001278684 uc002klx.5 |
|---|---|
| Distance: | 32 |
| Num_trans: | 16 |
| All_trans: | ENST00000405385.7:32 NM_173209:32 NM_173208:32 NM_001278684:32 uc002klx.5:32 ENST00000551557.1:-52 uc060myb.1:-52 ENST00000343820.9:85 uc002kly.5:85 ENST00000549253.5:-176 NM_001278682:-176 uc060mya.1:-176 ENST00000407501.6:263 uc002klw.5:263 ENST00000546979.5:417 uc060myc.1:417 |
TATA-Box annotation
| Distance to TSS: | -47 |
|---|---|
| Nearest PromoterID: | NM_173208 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
