Difference between revisions of "TSS:Hg 169183.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000405385.7:15 NM_173209:15 NM_173208:15 NM_001278684:15 uc002klx.5:15 ENST00000343820.9:68 uc002kly.5:68 ENST00000551557.1:-84 uc060myb.1:-84 ENS...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000405385.7:15 NM_173209:15 NM_173208:15 NM_001278684:15 uc002klx.5:15 ENST00000343820.9:68 uc002kly.5:68 ENST00000551557.1:-84 uc060myb.1:-84 ENST00000549253.5:-208 NM_001278682:-208 uc060mya.1:-208 ENST00000407501.6:246 uc002klw.5:246 ENST00000546979.5:400 uc060myc.1:400 | |all_trans=ENST00000405385.7:15 NM_173209:15 NM_173208:15 NM_001278684:15 uc002klx.5:15 ENST00000343820.9:68 uc002kly.5:68 ENST00000551557.1:-84 uc060myb.1:-84 ENST00000549253.5:-208 NM_001278682:-208 uc060mya.1:-208 ENST00000407501.6:246 uc002klw.5:246 ENST00000546979.5:400 uc060myc.1:400 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-23 | |distance_to_tss=-23 | ||
|end=3449636 | |end=3449636 | ||
| + | |end_of_center_position=3449629 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3449620 | |start=3449620 | ||
| + | |start_of_center_position=3449628 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000405385.7 NM_173209 NM_173208 NM_001278684 uc002klx.5 | |transcript_name=ENST00000405385.7 NM_173209 NM_173208 NM_001278684 uc002klx.5 | ||
Revision as of 08:58, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3449628 |
|---|---|
| End of the center position in the TSS region: | 3449629 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000405385.7 NM_173209 NM_173208 NM_001278684 uc002klx.5 |
|---|---|
| Distance: | 15 |
| Num_trans: | 16 |
| All_trans: | ENST00000405385.7:15 NM_173209:15 NM_173208:15 NM_001278684:15 uc002klx.5:15 ENST00000343820.9:68 uc002kly.5:68 ENST00000551557.1:-84 uc060myb.1:-84 ENST00000549253.5:-208 NM_001278682:-208 uc060mya.1:-208 ENST00000407501.6:246 uc002klw.5:246 ENST00000546979.5:400 uc060myc.1:400 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_173208 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
