Difference between revisions of "TSS:Hg 169188.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000577543.5:-84 uc060myd.1:-84 BC000814:100 X89750:-105 ENST00000551402.1:-119 uc010dkm.3:-119 AK309471:-119 NM_003244:-124 AF179900:178 CR450333:...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000577543.5:-84 uc060myd.1:-84 BC000814:100 X89750:-105 ENST00000551402.1:-119 uc010dkm.3:-119 AK309471:-119 NM_003244:-124 AF179900:178 CR450333:184 CU674410:184 KJ892273:184 KR709512:184 KR709513:184 KR709514:184 KR709515:184 KR712201:184 KR712206:184 ENST00000546979.5:-260 uc060myc.1:-260 ENST00000407501.6:-414 uc002klw.5:-414 | |all_trans=ENST00000577543.5:-84 uc060myd.1:-84 BC000814:100 X89750:-105 ENST00000551402.1:-119 uc010dkm.3:-119 AK309471:-119 NM_003244:-124 AF179900:178 CR450333:184 CU674410:184 KJ892273:184 KR709512:184 KR709513:184 KR709514:184 KR709515:184 KR712201:184 KR712206:184 ENST00000546979.5:-260 uc060myc.1:-260 ENST00000407501.6:-414 uc002klw.5:-414 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=129 | |distance_to_tss=129 | ||
|end=3450306 | |end=3450306 | ||
| + | |end_of_center_position=3450301 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3450295 | |start=3450295 | ||
| + | |start_of_center_position=3450300 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000577543.5 uc060myd.1 | |transcript_name=ENST00000577543.5 uc060myd.1 | ||
Revision as of 08:59, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3450300 |
|---|---|
| End of the center position in the TSS region: | 3450301 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000577543.5 uc060myd.1 |
|---|---|
| Distance: | -84 |
| Num_trans: | 22 |
| All_trans: | ENST00000577543.5:-84 uc060myd.1:-84 BC000814:100 X89750:-105 ENST00000551402.1:-119 uc010dkm.3:-119 AK309471:-119 NM_003244:-124 AF179900:178 CR450333:184 CU674410:184 KJ892273:184 KR709512:184 KR709513:184 KR709514:184 KR709515:184 KR712201:184 KR712206:184 ENST00000546979.5:-260 uc060myc.1:-260 ENST00000407501.6:-414 uc002klw.5:-414 |
TATA-Box annotation
| Distance to TSS: | 129 |
|---|---|
| Nearest PromoterID: | NM_003244 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
