Difference between revisions of "TSS:Hg 74352.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC004267:-3 ENST00000370388.4:-47 NM_001126063:-47 ENST00000471312.1:-321 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-3 | |distance=-3 | ||
| − | |distance_to_tss= | + | |distance_to_tss=51 |
|end=73225449 | |end=73225449 | ||
|end_of_center_position=73225445 | |end_of_center_position=73225445 | ||
| Line 12: | Line 12: | ||
|gene_description=KH domain containing 1 like | |gene_description=KH domain containing 1 like | ||
|gene_id=100129128 | |gene_id=100129128 | ||
| − | |gene_name=KH | + | |gene_name=KH domain containing 1 like |
|gene_source=HGNC:37274 | |gene_source=HGNC:37274 | ||
|gene_symbol=KHDC1L | |gene_symbol=KHDC1L | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001126063 | |nearest_refseq=NM_001126063 | ||
|nearest_unigene=Hs.663639 | |nearest_unigene=Hs.663639 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=73225440 | |start=73225440 | ||
|start_of_center_position=73225444 | |start_of_center_position=73225444 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-65(CCCTTTTTAAGG,-,0.00),-63(CTTTTTAAGGAC,+,0.00) |
| − | |transcript_name= | + | |transcript_name=BC004267 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_74352.1 | |tss_id=hg_74352.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 12:19, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73225444 |
|---|---|
| End of the center position in the TSS region: | 73225445 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC004267 |
|---|---|
| Distance: | -3 |
| Num_trans: | 4 |
| All_trans: | BC004267:-3 ENST00000370388.4:-47 NM_001126063:-47 ENST00000471312.1:-321 |
TATA-Box annotation
| Distance to TSS: | 51 |
|---|---|
| Nearest PromoterID: | NM_001126063 |
| Entrez ID: | 100129128 |
| Nearest Unigene: | Hs.663639 |
| Nearest Refseq: | NM_001126063 |
| Nearest Ensembl: | ENSG00000256980 |
| Gene Name: | KH domain containing 1 like |
| Gene Alias: | - |
| Gene Description: | KH domain containing 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -65(CCCTTTTTAAGG,-,0.00),-63(CTTTTTAAGGAC,+,0.00) |
