Difference between revisions of "TSS:Hg 82385.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GCS1L= | |GCS1L= | ||
| − | |all_trans=ENST00000617043.4:9 ENST00000437486.5:9 NM_001284311 | + | |all_trans=ENST00000617043.4:9 ENST00000437486.5:9 NM_001284311:9 AK300859:22 AK300644:25 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 10: | Line 10: | ||
|entrez_id=11033 | |entrez_id=11033 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=CENTA1 | + | |gene_alias=CENTA1{{!}}GCS1L{{!}}p42IP4 |
|gene_description=ArfGAP with dual PH domains 1 | |gene_description=ArfGAP with dual PH domains 1 | ||
|gene_id=11033 | |gene_id=11033 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_006869 | |nearest_refseq=NM_006869 | ||
|nearest_unigene=Hs.602573 | |nearest_unigene=Hs.602573 | ||
| − | |num_trans= | + | |num_trans=5 |
|p42IP4= | |p42IP4= | ||
|species=human | |species=human | ||
| Line 29: | Line 29: | ||
|start_of_center_position=920904 | |start_of_center_position=920904 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000617043.4 ENST00000437486.5 NM_001284311 | + | |transcript_name=ENST00000617043.4 ENST00000437486.5 NM_001284311 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_82385.1 | |tss_id=hg_82385.1 | ||
Revision as of 15:27, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 920904 |
|---|---|
| End of the center position in the TSS region: | 920905 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000617043.4 ENST00000437486.5 NM_001284311 |
|---|---|
| Distance: | 9 |
| Num_trans: | 5 |
| All_trans: | ENST00000617043.4:9 ENST00000437486.5:9 NM_001284311:9 AK300859:22 AK300644:25 |
TATA-Box annotation
| Distance to TSS: | -15 |
|---|---|
| Nearest PromoterID: | NM_001284311 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | CENTA1|GCS1L|p42IP4 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
