Difference between revisions of "TSS:Hg 100712.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=7301 |entrez_id=5079 |gc_percent=0.651741 |gene_alias=ALL3|BSAP |gene_description=paired box 5 |gene_name=PAX5 |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BSAP= | ||
| + | |all_trans=U62539:438 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=438 | ||
|distance_to_tss=7301 | |distance_to_tss=7301 | ||
| + | |end=37027196 | ||
|entrez_id=5079 | |entrez_id=5079 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=ALL3|BSAP | |gene_alias=ALL3|BSAP | ||
|gene_description=paired box 5 | |gene_description=paired box 5 | ||
| − | |gene_name=PAX5 | + | |gene_id=5079 |
| + | |gene_name=paired box 5 | ||
| + | |gene_source=HGNC:8619 | ||
| + | |gene_symbol=PAX5 | ||
| + | |gene_synonyms=BSAP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8619 | ||
|nearest_ensembl=ENSG00000196092 | |nearest_ensembl=ENSG00000196092 | ||
|nearest_promoter_id=NM_001280549 | |nearest_promoter_id=NM_001280549 | ||
|nearest_refseq=NM_016734 | |nearest_refseq=NM_016734 | ||
|nearest_unigene=Hs.654464 | |nearest_unigene=Hs.654464 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=37027159 | ||
| + | |strand=- | ||
| + | |transcript_name=U62539 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100712.1 | |tss_id=hg_100712.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:15, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | U62539 |
|---|---|
| Distance: | 438 |
| Num_trans: | 1 |
| All_trans: | U62539:438 |
TATA-Box annotation
| Distance to TSS: | 7301 |
|---|---|
| Nearest PromoterID: | NM_001280549 |
| Entrez ID: | 5079 |
| Nearest Unigene: | Hs.654464 |
| Nearest Refseq: | NM_016734 |
| Nearest Ensembl: | ENSG00000196092 |
| Gene Name: | paired box 5 |
| Gene Alias: | ALL3 |
| Gene Description: | paired box 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
