Difference between revisions of "TSS:Hg 166234.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000664824.1:0 ENST00000658096.1:0 ENST00000662750.1:0 ENST00000661340.1:0 ENST00000658202.1:0 ENST00000662582.1:0 ENST00000662853.1:0 ENST00000667855.1:0 ENST00000592135.5:0 ENST00000656704.1:0 ENST00000666319.1:0 ENST00000658683.1:0 ENST00000592094.1:0 ENST00000587874.5:0 ENST00000588654.2:0 AL832479:0 AK123585:0 AK311685:0 ENST00000658754.1:-10 ENST00000341011.11:-205 BC035366:-205 ENST00000656132.1:370 ENST00000665553.1:-484 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_027412 | |nearest_refseq=NR_027412 | ||
|nearest_unigene=Hs.546897 | |nearest_unigene=Hs.546897 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=43388306 | |start=43388306 | ||
|start_of_center_position=43388323 | |start_of_center_position=43388323 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000664824.1 ENST00000658096.1 ENST00000662750.1 ENST00000661340.1 ENST00000658202.1 ENST00000662582.1 ENST00000662853.1 ENST00000667855.1 ENST00000592135.5 ENST00000656704.1 ENST00000666319.1 ENST00000658683.1 ENST00000592094.1 ENST00000587874.5 ENST00000588654.2 AL832479 AK123585 AK311685 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_166234.1 | |tss_id=hg_166234.1 | ||
Revision as of 17:42, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 43388323 |
|---|---|
| End of the center position in the TSS region: | 43388324 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000664824.1 ENST00000658096.1 ENST00000662750.1 ENST00000661340.1 ENST00000658202.1 ENST00000662582.1 ENST00000662853.1 ENST00000667855.1 ENST00000592135.5 ENST00000656704.1 ENST00000666319.1 ENST00000658683.1 ENST00000592094.1 ENST00000587874.5 ENST00000588654.2 AL832479 AK123585 AK311685 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000664824.1:0 ENST00000658096.1:0 ENST00000662750.1:0 ENST00000661340.1:0 ENST00000658202.1:0 ENST00000662582.1:0 ENST00000662853.1:0 ENST00000667855.1:0 ENST00000592135.5:0 ENST00000656704.1:0 ENST00000666319.1:0 ENST00000658683.1:0 ENST00000592094.1:0 ENST00000587874.5:0 ENST00000588654.2:0 AL832479:0 AK123585:0 AK311685:0 ENST00000658754.1:-10 ENST00000341011.11:-205 BC035366:-205 ENST00000656132.1:370 ENST00000665553.1:-484 |
TATA-Box annotation
| Distance to TSS: | 575 |
|---|---|
| Nearest PromoterID: | NR_027412 |
| Entrez ID: | 100130581 |
| Nearest Unigene: | Hs.546897 |
| Nearest Refseq: | NR_027412 |
| Nearest Ensembl: | ENSG00000188825 |
| Gene Name: | long intergenic non-protein coding RNA 910 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 910 |
| Gene Type: | ncRNA |
| CpG%: | 0.055 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
