Difference between revisions of "TSS:Hg 230465.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000615331. | + | |all_trans=BC082993:-7 ENST00000615331.5:-35 NM_001099415:-35 NR_160304:-35 NR_160303:-35 ENST00000415277.2:150 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=-7 | |distance=-7 | ||
| − | |distance_to_tss= | + | |distance_to_tss=38 |
|end=75486264 | |end=75486264 | ||
|end_of_center_position=75486261 | |end_of_center_position=75486261 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001099415 | |nearest_refseq=NM_001099415 | ||
|nearest_unigene=Hs.712563 | |nearest_unigene=Hs.712563 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=75486257 | |start=75486257 | ||
|start_of_center_position=75486260 | |start_of_center_position=75486260 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC082993 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_230465.1 | |tss_id=hg_230465.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 11:39, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75486260 |
|---|---|
| End of the center position in the TSS region: | 75486261 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC082993 |
|---|---|
| Distance: | -7 |
| Num_trans: | 6 |
| All_trans: | BC082993:-7 ENST00000615331.5:-35 NM_001099415:-35 NR_160304:-35 NR_160303:-35 ENST00000415277.2:150 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_001099415 |
| Entrez ID: | 100101267 |
| Nearest Unigene: | Hs.712563 |
| Nearest Refseq: | NM_001099415 |
| Nearest Ensembl: | ENSG00000272391 |
| Gene Name: | POM121 transmembrane nucleoporin C |
| Gene Alias: | POM121-2 |
| Gene Description: | POM121 transmembrane nucleoporin C |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
