Difference between revisions of "TSS:Hg 84372.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001099415:0 | + | |all_trans=ENST00000615331.5:0 NM_001099415:0 NR_160304:0 NR_160303:0 BC082993:16 ENST00000415277.2:179 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=75486309 | |end=75486309 | ||
|end_of_center_position=75486298 | |end_of_center_position=75486298 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001099415 | |nearest_refseq=NM_001099415 | ||
|nearest_unigene=Hs.712563 | |nearest_unigene=Hs.712563 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=75486286 | |start=75486286 | ||
|start_of_center_position=75486297 | |start_of_center_position=75486297 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001099415 | + | |transcript_name=ENST00000615331.5 NM_001099415 NR_160304 NR_160303 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_84372.1 | |tss_id=hg_84372.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DET5 | + | |uniprot_id=A8CG34 B4DET5 |
}} | }} | ||
Revision as of 16:13, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75486297 |
|---|---|
| End of the center position in the TSS region: | 75486298 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000615331.5 NM_001099415 NR_160304 NR_160303 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000615331.5:0 NM_001099415:0 NR_160304:0 NR_160303:0 BC082993:16 ENST00000415277.2:179 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001099415 |
| Entrez ID: | 100101267 |
| Nearest Unigene: | Hs.712563 |
| Nearest Refseq: | NM_001099415 |
| Nearest Ensembl: | ENSG00000272391 |
| Gene Name: | POM121 transmembrane nucleoporin C |
| Gene Alias: | POM121-2 |
| Gene Description: | POM121 transmembrane nucleoporin C |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
