Difference between revisions of "TSS:Hg 85225.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000442166.2:7 NR_038910 | + | |all_trans=ENST00000442166.2:7 NR_038910:7 AK097705:7 ENST00000446022.1:-140 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038910 | |nearest_refseq=NR_038910 | ||
|nearest_unigene=Hs.714123 | |nearest_unigene=Hs.714123 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=100604044 | |start=100604044 | ||
|start_of_center_position=100604055 | |start_of_center_position=100604055 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000442166.2 NR_038910 | + | |transcript_name=ENST00000442166.2 NR_038910 AK097705 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_85225.1 | |tss_id=hg_85225.1 | ||
Revision as of 16:33, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 100604055 |
|---|---|
| End of the center position in the TSS region: | 100604056 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000442166.2 NR_038910 AK097705 |
|---|---|
| Distance: | 7 |
| Num_trans: | 4 |
| All_trans: | ENST00000442166.2:7 NR_038910:7 AK097705:7 ENST00000446022.1:-140 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NR_038910 |
| Entrez ID: | 100129845 |
| Nearest Unigene: | Hs.714123 |
| Nearest Refseq: | NR_038910 |
| Nearest Ensembl: | ENSG00000224729 |
| Gene Name: | PCOLCE antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | PCOLCE antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
