Difference between revisions of "TSS:Hg 169187.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TGIF= | |TGIF= | ||
| − | |all_trans=ENST00000551402.1:0 NM_003244 | + | |all_trans=ENST00000343820.10:0 ENST00000551402.1:0 NM_003244:0 AK309471:0 X89750:6 ENST00000577543.5:27 ENST00000546979.5:-128 BC000814:221 ENST00000407501.6:-282 AF179900:299 CR450333:305 KJ892273:305 KR709512:305 KR709513:305 KR709514:305 KR709515:305 KR712201:305 KR712206:305 CU674410:305 NM_001278684:-457 NM_173208:-457 NM_173209:-457 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 10: | Line 10: | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4{{!}}TGIF |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003244 | |nearest_refseq=NM_003244 | ||
|nearest_unigene=Hs.373550 | |nearest_unigene=Hs.373550 | ||
| − | |num_trans= | + | |num_trans=22 |
|species=human | |species=human | ||
|start=3450163 | |start=3450163 | ||
|start_of_center_position=3450174 | |start_of_center_position=3450174 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000551402.1 NM_003244 | + | |transcript_name=ENST00000343820.10 ENST00000551402.1 NM_003244 AK309471 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_169187.1 | |tss_id=hg_169187.1 | ||
Revision as of 18:50, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3450174 |
|---|---|
| End of the center position in the TSS region: | 3450175 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000343820.10 ENST00000551402.1 NM_003244 AK309471 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000343820.10:0 ENST00000551402.1:0 NM_003244:0 AK309471:0 X89750:6 ENST00000577543.5:27 ENST00000546979.5:-128 BC000814:221 ENST00000407501.6:-282 AF179900:299 CR450333:305 KJ892273:305 KR709512:305 KR709513:305 KR709514:305 KR709515:305 KR712201:305 KR712206:305 CU674410:305 NM_001278684:-457 NM_173208:-457 NM_173209:-457 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_003244 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4|TGIF |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
