Difference between revisions of "TSS:Hg 169190.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TGIF= | |TGIF= | ||
| − | |all_trans=CR450333 | + | |all_trans=CR450333:-288 KJ892273:-288 KR709512:-288 KR709513:-288 KR709514:-288 KR709515:-288 KR712201:-288 KR712206:-288 CU674410:-288 AF179900:-294 BC000814:-372 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 10: | Line 10: | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4{{!}}TGIF |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=3450785 | |start_of_center_position=3450785 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=CR450333 | + | |transcript_name=CR450333 KJ892273 KR709512 KR709513 KR709514 KR709515 KR712201 KR712206 CU674410 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_169190.1 | |tss_id=hg_169190.1 | ||
Revision as of 18:50, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3450785 |
|---|---|
| End of the center position in the TSS region: | 3450786 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | CR450333 KJ892273 KR709512 KR709513 KR709514 KR709515 KR712201 KR712206 CU674410 |
|---|---|
| Distance: | -288 |
| Num_trans: | 11 |
| All_trans: | CR450333:-288 KJ892273:-288 KR709512:-288 KR709513:-288 KR709514:-288 KR709515:-288 KR712201:-288 KR712206:-288 CU674410:-288 AF179900:-294 BC000814:-372 |
TATA-Box annotation
| Distance to TSS: | 613 |
|---|---|
| Nearest PromoterID: | NM_003244 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4|TGIF |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
