Difference between revisions of "TSS:Hg 170117.1"
From referenceTSS
| Line 4: | Line 4: | ||
|UTA= | |UTA= | ||
|UTR= | |UTR= | ||
| − | |all_trans=ENST00000323329.3:0 | + | |all_trans=ENST00000255226.11:0 ENST00000323329.3:0 NM_007163:0 AK074236:0 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=45615481 | |end=45615481 | ||
|end_of_center_position=45615478 | |end_of_center_position=45615478 | ||
|entrez_id=8170 | |entrez_id=8170 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=HUT2 | + | |gene_alias=HUT2{{!}}UT-A2{{!}}UT2{{!}}UTA{{!}}UTR{{!}}hUT-A6 |
|gene_description=solute carrier family 14 member 2 | |gene_description=solute carrier family 14 member 2 | ||
|gene_id=8170 | |gene_id=8170 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_007163 | |nearest_refseq=NM_007163 | ||
|nearest_unigene=Hs.710927 | |nearest_unigene=Hs.710927 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=45615473 | |start=45615473 | ||
|start_of_center_position=45615477 | |start_of_center_position=45615477 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000323329.3 | + | |transcript_name=ENST00000255226.11 ENST00000323329.3 NM_007163 AK074236 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_170117.1 | |tss_id=hg_170117.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=E7EPU1 | + | |uniprot_id=E7EPU1 Q15849 |
}} | }} | ||
Revision as of 19:11, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45615477 |
|---|---|
| End of the center position in the TSS region: | 45615478 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000255226.11 ENST00000323329.3 NM_007163 AK074236 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000255226.11:0 ENST00000323329.3:0 NM_007163:0 AK074236:0 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_007163 |
| Entrez ID: | 8170 |
| Nearest Unigene: | Hs.710927 |
| Nearest Refseq: | NM_007163 |
| Nearest Ensembl: | ENSG00000132874 |
| Gene Name: | solute carrier family 14 member 2 |
| Gene Alias: | HUT2|UT-A2|UT2|UTA|UTR|hUT-A6 |
| Gene Description: | solute carrier family 14 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
