Difference between revisions of "TSS:Hg 100745.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=7899 |entrez_id=51010 |gc_percent=0.41791 |gene_alias=CGI-102|PCH1B|RRP40|Rrp40p|bA3J10.7|hRrp-40|p10 |gene_description=exosome...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PCH1B= | ||
| + | |RRP40= | ||
| + | |Rrp40p= | ||
| + | |all_trans=DQ573522:-237 | ||
| + | |bA3J10.7= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-237 | ||
|distance_to_tss=7899 | |distance_to_tss=7899 | ||
| + | |end=37777193 | ||
|entrez_id=51010 | |entrez_id=51010 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| Line 8: | Line 16: | ||
|gene_name=EXOSC3 | |gene_name=EXOSC3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hRrp-40= | ||
|nearest_ensembl=ENSG00000107371 | |nearest_ensembl=ENSG00000107371 | ||
|nearest_promoter_id=NM_001002269 | |nearest_promoter_id=NM_001002269 | ||
|nearest_refseq=NM_016042 | |nearest_refseq=NM_016042 | ||
|nearest_unigene=Hs.602571 | |nearest_unigene=Hs.602571 | ||
| + | |num_trans=1 | ||
| + | |p10= | ||
| + | |species=human | ||
| + | |start=37777192 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ573522 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100745.1 | |tss_id=hg_100745.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:13, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ573522 |
|---|---|
| Distance: | -237 |
| Num_trans: | 1 |
| All_trans: | DQ573522:-237 |
TATA-Box annotation
| Distance to TSS: | 7899 |
|---|---|
| Nearest PromoterID: | NM_001002269 |
| Entrez ID: | 51010 |
| Nearest Unigene: | Hs.602571 |
| Nearest Refseq: | NM_016042 |
| Nearest Ensembl: | ENSG00000107371 |
| Gene Name: | EXOSC3 |
| Gene Alias: | CGI-102 |
| Gene Description: | exosome component 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
